dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004721_4|CGC1
Gene ID: MGYG000004721_00299
Location and strand information: 9961 - 11163 (+)
Family: 2.A.6.2.4
Protein type: TC
Protein description: Toluene efflux pump periplasmic linker protein TtgG

Gene clsuter ID: MGYG000004721_4|CGC1
Gene ID: MGYG000004721_00300
Location and strand information: 11201 - 14470 (+)
Family: 2.A.6.2.22
Protein type: TC
Protein description: Efflux pump membrane transporter BepE

Gene clsuter ID: MGYG000004721_4|CGC1
Gene ID: MGYG000004721_00301
Location and strand information: 14486 - 15871 (+)
Family: 1.B.17.3.6
Protein type: TC
Protein description: Outer membrane protein OprM

Gene clsuter ID: MGYG000004721_4|CGC1
Gene ID: MGYG000004721_00302
Location and strand information: 15901 - 16680 (+)
Family: null
Protein type: null
Protein description: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase

Gene clsuter ID: MGYG000004721_4|CGC1
Gene ID: MGYG000004721_00303
Location and strand information: 17205 - 18113 (+)
Family: null
Protein type: null
Protein description: NAD kinase

Gene clsuter ID: MGYG000004721_4|CGC1
Gene ID: MGYG000004721_00304
Location and strand information: 18163 - 19827 (+)
Family: 3.A.1.106.2
Protein type: TC
Protein description: Putative multidrug export ATP-binding/permease protein

Gene clsuter ID: MGYG000004721_4|CGC1
Gene ID: MGYG000004721_00305
Location and strand information: 19993 - 22437 (+)
Family: GH95|CBM2|CBM13
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.1688
Protein molecular weight: 90682.9
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004721_4|CGC1
Gene ID: MGYG000004721_00306
Location and strand information: 22562 - 23056 (+)
Family: null
Protein type: null
Protein description: Low molecular weight protein-tyrosine-phosphatase YfkJ

Gene clsuter ID: MGYG000004721_4|CGC1
Gene ID: MGYG000004721_00307
Location and strand information: 23166 - 26663 (+)
Family: PL1_2|PL1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8465
Protein molecular weight: 122838.5
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004721_4|CGC1
Gene ID: MGYG000004721_00308
Location and strand information: 26819 - 27922 (+)
Family: PL1_2|PL1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.036
Protein molecular weight: 40552.23
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004721_4|CGC1
Gene ID: MGYG000004721_00309
Location and strand information: 27985 - 30075 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004721_4|CGC1
Gene ID: MGYG000004721_00310
Location and strand information: 30740 - 32977 (+)
Family: CBM35|PL11|PL11_1|CBM2
Protein type: CAZyme
Protein description: Rhamnogalacturonan endolyase YesW
Protein isoelectric point: 5.5171
Protein molecular weight: 80969.97
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004721_4|CGC1
Gene ID: MGYG000004721_00311
Location and strand information: 32997 - 33197 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004721_4|CGC1
Gene ID: MGYG000004721_00312
Location and strand information: 33228 - 36491 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004721_4|CGC1
Gene ID: MGYG000004721_00313
Location and strand information: 36516 - 38144 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004721_4|CGC1
Gene ID: MGYG000004721_00314
Location and strand information: 38481 - 41663 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000004721_4|CGC1
Gene ID: MGYG000004721_00315
Location and strand information: 41678 - 43522 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004721_4|CGC1
Gene ID: MGYG000004721_00316
Location and strand information: 43971 - 48143 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000004721_4|CGC1
Gene ID: MGYG000004721_00317
Location and strand information: 48157 - 51414 (+)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.8695
Protein molecular weight: 120429.65
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004721_4|CGC1
Gene ID: MGYG000004721_00318
Location and strand information: 51550 - 52881 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.118
Protein molecular weight: 49679
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004721_4|CGC1
Gene ID: MGYG000004721_00319
Location and strand information: 53225 - 56083 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004721_4|CGC1
Gene ID: MGYG000004721_00320
Location and strand information: 56105 - 57322 (+)
Family: 2.A.1.7.1
Protein type: TC
Protein description: L-fucose-proton symporter

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000004721_00305	GH95_e0\|CBM2_e92\|CBM13_e181\|3.2.1.-	xylan\|pectin
MGYG000004721_00307	PL1_e38
MGYG000004721_00308
MGYG000004721_00310	PL11_e0\|CBM35_e56\|CBM2_e72\|4.2.2.23	pectin
MGYG000004721_00317	GH106_e9
MGYG000004721_00318

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004721_00299	Toluene efflux pump periplasmic linker protein TtgG	TC	9961	11163	+	2.A.6.2.4
MGYG000004721_00300	Efflux pump membrane transporter BepE	TC	11201	14470	+	2.A.6.2.22
MGYG000004721_00301	Outer membrane protein OprM	TC	14486	15871	+	1.B.17.3.6
MGYG000004721_00302	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase	null	15901	16680	+	Hexapep\| Acetyltransf_11
MGYG000004721_00303	NAD kinase	null	17205	18113	+	NAD_kinase\| NAD_kinase_C
MGYG000004721_00304	Putative multidrug export ATP-binding/permease protein	TC	18163	19827	+	3.A.1.106.2
MGYG000004721_00305	hypothetical protein	CAZyme	19993	22437	+	GH95\| CBM2\| CBM13
MGYG000004721_00306	Low molecular weight protein-tyrosine-phosphatase YfkJ	null	22562	23056	+	LMWPc
MGYG000004721_00307	hypothetical protein	CAZyme	23166	26663	+	PL1_2\| PL1
MGYG000004721_00308	hypothetical protein	CAZyme	26819	27922	+	PL1_2\| PL1
MGYG000004721_00309	hypothetical protein	null	27985	30075	+	No domain
MGYG000004721_00310	Rhamnogalacturonan endolyase YesW	CAZyme	30740	32977	+	CBM35\| PL11\| PL11_1\| CBM2
MGYG000004721_00311	hypothetical protein	null	32997	33197	-	No domain
MGYG000004721_00312	hypothetical protein	TC	33228	36491	+	1.B.14.6.1
MGYG000004721_00313	hypothetical protein	null	36516	38144	+	SusD-like_3\| SusD_RagB
MGYG000004721_00314	TonB-dependent receptor SusC	TC	38481	41663	+	1.B.14.6.1
MGYG000004721_00315	hypothetical protein	null	41678	43522	+	SusD-like_3\| SusD_RagB
MGYG000004721_00316	Sensor histidine kinase RcsC	TF	43971	48143	+	HTH_AraC+HTH_AraC
MGYG000004721_00317	hypothetical protein	CAZyme	48157	51414	+	GH106
MGYG000004721_00318	hypothetical protein	CAZyme	51550	52881	-	GH28
MGYG000004721_00319	hypothetical protein	null	53225	56083	+	Fucokinase\| GHMP_kinases_N\| GHMP_kinases_C
MGYG000004721_00320	L-fucose-proton symporter	TC	56105	57322	+	2.A.1.7.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature